update pattern handling with cli + add new commands

src/main/java/cli/PatternHandling.java

...a/tmltranslator/patternhandling/PatternConfiguration.java

...ava/tmltranslator/patternhandling/PatternIntegration.java

src/main/java/tmltranslator/patternhandling/TaskPattern.java

src/main/java/tmltranslator/patternhandling/TaskPorts.java

src/main/java/ui/GTURTLEModeling.java

src/main/java/ui/window/JDialogPatternHandling.java