Add timeout for Proverif processes in tests + rename cli PatternHandling class

src/main/java/cli/DiplodocusPatternHandling.java

src/main/java/cli/Interpreter.java

...translator/patternhandling/SecurityGenerationForTMAP.java

...l/src/test/java/cli/CLIDiplodocusPatternHandlingTest.java

ttool/src/test/java/test/AbstractTest.java

...a/tmltranslator/AutoSecurityGenerationDiplodocusTest.java

...l/src/test/java/tmltranslator/DiplodocusSecurityTest.java