add comments in script files that test pattern handling

ttool/src/test/resources/cli/testPatternHandling/tmr/cli/apply-tmr-in-modelWithOneSensor

-pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithOneSensor.tmap
-pa a -p resources/test/cli/testPatternHandling/tmr/
-pa a -pc resources/test/cli/testPatternHandling/tmr/modelWithOneSensor-config.json
-pa a -g resources/test/cli/testPatternHandling/tmr/modelsAfterIntegratingTMR/ modelWithOneSensorIntegTMR
+pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithOneSensor.tmap  # Path of the model in which we will integrate the pattern.
+pa a -p resources/test/cli/testPatternHandling/tmr/  # Path of the pattern that we want to integrate.
+pa a -pc resources/test/cli/testPatternHandling/tmr/modelWithOneSensor-config.json  # Path of the configuration json file.
+pa a -g resources/test/cli/testPatternHandling/tmr/modelsAfterIntegratingTMR/ modelWithOneSensorIntegTMR  # Generate TMAP file of the model after intergrating the pattern. The generated file will be located in the given path and will have "modelWithOneSensorIntegTMR" as name.

ttool/src/test/resources/cli/testPatternHandling/tmr/cli/apply-tmr-in-modelWithThreeSensors

-pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithThreeSensors.tmap
-pa a -p resources/test/cli/testPatternHandling/tmr/
-pa a -pc resources/test/cli/testPatternHandling/tmr/modelWithThreeSensors-config.json
-pa a -g resources/test/cli/testPatternHandling/tmr/modelsAfterIntegratingTMR/ modelWithThreeSensorsIntegTMR
+pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithThreeSensors.tmap  # Path of the model in which we will integrate the pattern.
+pa a -p resources/test/cli/testPatternHandling/tmr/  # Path of the pattern that we want to integrate.
+pa a -pc resources/test/cli/testPatternHandling/tmr/modelWithThreeSensors-config.json  # Path of the configuration json file.
+pa a -g resources/test/cli/testPatternHandling/tmr/modelsAfterIntegratingTMR/ modelWithThreeSensorsIntegTMR  # Generate TMAP file of the model after intergrating the pattern. The generated file will be located in the given path and will have "modelWithThreeSensorsIntegTMR" as name.

ttool/src/test/resources/cli/testPatternHandling/tmr/cli/configurate-tmr-for-modelWithOneSensor

-pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithOneSensor.tmap
-pa sc -p resources/test/cli/testPatternHandling/tmr/
-pa sc -sp
-pa sc -ct SensorClone Sensor
-pa sc -ct SensorClone2 Sensor
-pa sc -ctl
-pa sc -ctr SensorClone
-pa sc -ct SensorClone1 Sensor
-pa sc -plnc
-pa sc -pl InterpreterC.dataC
-pa sc -co InterpreterA.dataA Sensor.sensorData
-pa sc -co InterpreterB.dataB SensorClone1.sensorData 
-pa sc -co InterpreterC.dataC SensorClone2.sensorData
-pa sc -co Voter.resultData Receiver.sensorData
-pa sc -cor InterpreterA.dataA
-pa sc -co InterpreterA.dataA Sensor.sensorData
-pa sc -co Voter.moveto_FAIL_SAFE Receiver.sensorData NEW
-pa sc -col
-pa sc -cptl
-pa sc -cpd ALL
-pa sc -tctl
-pa sc -tcn SensorClone1 BusEnvironment
-pa sc -tcm SensorClone2 SensorClone1
-pa sc -tcn Voter MainBus
-pa sc -mcn SensorClone1.sensorData BusReceiver
-pa sc -mcm InterpreterA.resA SensorClone1.sensorData
-pa sc -mctl
-pa sc -ua Timer dataReceivingTimeout 1000
-pa sc -m resources/test/cli/testPatternHandling/tmr/modelWithOneSensor-config.json
+pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithOneSensor.tmap  # Path of the model in which we will integrate the pattern.
+pa sc -p resources/test/cli/testPatternHandling/tmr/  # Path of the pattern that we want to integrate.
+pa sc -sp  # Get the name of the selected pattern.
+pa sc -ct SensorClone Sensor  # Create a task clone named SensorClone from the task Sensor.
+pa sc -ct SensorClone2 Sensor  # Create a task clone named SensorClone2 from the task Sensor.
+pa sc -ctl  # Get list of cloned tasks.
+pa sc -ctr SensorClone  # Remove the cloned task SensorClone.
+pa sc -ct SensorClone1 Sensor  # Create a task clone named SensorClone1 from the task Sensor.
+pa sc -plnc  # Get the list of pattern's ports that should be connected.
+pa sc -pl InterpreterC.dataC  # Get the list of available ports in model that could be used to connect with InterpreterC.dataC.
+pa sc -co InterpreterA.dataA Sensor.sensorData  # Connect InterpreterA.dataA (pattern side) with Sensor.sensorData (model side).
+pa sc -co InterpreterB.dataB SensorClone1.sensorData  # Connect InterpreterB.dataB (pattern side) with SensorClone1.sensorData (model side).
+pa sc -co InterpreterC.dataC SensorClone2.sensorData  # Connect InterpreterC.dataC (pattern side) with SensorClone2.sensorData (model side).
+pa sc -co Voter.resultData Receiver.sensorData  # Connect Voter.resultData (pattern side) with Receiver.sensorData (model side).
+pa sc -cor InterpreterA.dataA  # Remove the connection of InterpreterA.dataA.
+pa sc -co InterpreterA.dataA Sensor.sensorData  # Connect InterpreterA.dataA (pattern side) with Sensor.sensorData (model side).
+pa sc -co Voter.moveto_FAIL_SAFE Receiver.sensorData NEW  # Connect Voter.moveto_FAIL_SAFE (pattern side) with a New port.
+pa sc -col  # get the list of connections already made.
+pa sc -cptl  # get list of ports to be configured.
+pa sc -cpd ALL  # Choose to remove all the ports as decision.
+pa sc -tctl  # Get list of tasks to be mapped. 
+pa sc -tcn SensorClone1 BusEnvironment  # Map task SensorClone1 in a new CPU that will be linked to the bus BusEnvironment.
+pa sc -tcm SensorClone2 SensorClone1  # Map task SensorClone2 in the same CPU as SensorClone1.
+pa sc -tcn Voter MainBus  # Map task Voter in a new CPU that will be linked to the bus MainBus.
+pa sc -mcn SensorClone1.sensorData BusReceiver  # Map channel SensorClone1.sensorData in a new Memory that will be linked to the bus BusReceiver.
+pa sc -mcm InterpreterA.resA SensorClone1.sensorData  # Map channel InterpreterA.resA in the same Memory as SensorClone1.sensorData.
+pa sc -mctl  # Get list of channels to be mapped.
+pa sc -ua Timer dataReceivingTimeout 1000  # Change the value of the attribut dataReceivingTimeout to 1000.
+pa sc -m resources/test/cli/testPatternHandling/tmr/modelWithOneSensor-config.json  # Create the configuration json file by giving a name and a path for this json file.

ttool/src/test/resources/cli/testPatternHandling/tmr/cli/configurate-tmr-for-modelWithThreeSensors

-pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithThreeSensors.tmap
-pa sc -p resources/test/cli/testPatternHandling/tmr/
-pa sc -sp
-pa sc -ctl
-pa sc -plnc
-pa sc -pl InterpreterC.dataC
-pa sc -co InterpreterA.dataA Sensor1.sensorData1
-pa sc -co InterpreterB.dataB Sensor2.sensorData2
-pa sc -co InterpreterC.dataC Sensor3.sensorData3
-pa sc -co Voter.resultData Receiver.sensorData1
-pa sc -co Voter.moveto_FAIL_SAFE Receiver.sensorData1 NEW
-pa sc -cpd ALL
-pa sc -tcn InterpreterB MainBus
-pa sc -tcm InterpreterA InterpreterB
-pa sc -ua Timer dataReceivingTimeout 500
-pa sc -m resources/test/cli/testPatternHandling/tmr/modelWithThreeSensors-config.json
+pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithThreeSensors.tmap  # Path of the model in which we will integrate the pattern.
+pa sc -p resources/test/cli/testPatternHandling/tmr/  # Path of the pattern that we want to integrate.
+pa sc -sp  # Get the name of the selected pattern.
+pa sc -plnc  # Get the list of pattern's ports that should be connected.
+pa sc -pl InterpreterC.dataC  # Get the list of available ports in model that could be used to connect with InterpreterC.dataC.
+pa sc -co InterpreterA.dataA Sensor1.sensorData1  # Connect InterpreterA.dataA (pattern side) with Sensor1.sensorData1 (model side).
+pa sc -co InterpreterB.dataB Sensor2.sensorData2  # Connect InterpreterB.dataB (pattern side) with Sensor2.sensorData2 (model side).
+pa sc -co InterpreterC.dataC Sensor3.sensorData3  # Connect InterpreterC.dataC (pattern side) with Sensor3.sensorData3 (model side).
+pa sc -co Voter.resultData Receiver.sensorData1  # Connect Voter.resultData (pattern side) with Sensor.sensorData (model side).
+pa sc -co Voter.moveto_FAIL_SAFE Receiver.sensorData1 NEW  # Connect Voter.moveto_FAIL_SAFE (pattern side) with a New port.
+pa sc -cpd ALL  # Choose to remove all the ports as decision.
+pa sc -tcn InterpreterB MainBus  # Map task InterpreterB in a new CPU that will be linked to the bus MainBus.
+pa sc -tcm InterpreterA InterpreterB  # Map task InterpreterA in the same CPU as InterpreterB.
+pa sc -ua Timer dataReceivingTimeout 500  # Change the value of the attribut dataReceivingTimeout to 500.
+pa sc -m resources/test/cli/testPatternHandling/tmr/modelWithThreeSensors-config.json  # Create the configuration json file by giving a name and a path for this json file.

ttool/src/test/resources/cli/testPatternHandling/tmr/cli/create-tmr

-pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/tmrPattern.tmap
-pa c -n tmr
-pa c -p resources/test/cli/testPatternHandling/
-pa c -t
-pa c -a Voter Timer InterpreterA InterpreterB
-pa c -r Timer
-pa c -a InterpreterC Timer
-pa c -l
-pa c -m
\ No newline at end of file
+pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/tmrPattern.tmap  # Path of the model from which we will create a pattern.
+pa c -n tmr  # Give a name to the pattern to create.
+pa c -p resources/test/cli/testPatternHandling/  # Path where patthern files will be created.
+pa c -t  # Show the tasks names of the model "tmrPattern".
+pa c -a Voter Timer InterpreterA InterpreterB  # Select the tasks that will make up the pattern.
+pa c -r Timer  # Remove the task Timer from the list of tasks that will make up the pattern.
+pa c -a InterpreterC Timer  # Add new elements in the previous list of tasks.
+pa c -l  # Get the current tasks that will constitue the pattern.
+pa c -m  # Make the pattern.

ttool/src/test/resources/cli/testPatternHandling/tmr/cli/incomplete-configuration-tmr-for-modelWithOneSensor

+pa dltmap ../src/test/resources/cli/testPatternHandling/tmr/input/modelsToIntegrateTMR/modelWithOneSensor.tmap  # Path of the model in which we will integrate the pattern.
+pa sc -p resources/test/cli/testPatternHandling/tmr/  # Path of the pattern that we want to integrate.
+pa sc -sp  # Get the name of the selected pattern.
+pa sc -ct SensorClone Sensor  # Create a task clone named SensorClone from the task Sensor.
+pa sc -ct SensorClone2 Sensor  # Create a task clone named SensorClone2 from the task Sensor.
+pa sc -ctl  # Get list of cloned tasks.
+pa sc -ctr SensorClone  # Remove the cloned task SensorClone.
+pa sc -ct SensorClone1 Sensor  # Create a task clone named SensorClone1 from the task Sensor.
+pa sc -plnc  # Get the list of pattern's ports that should be connected.
+pa sc -pl InterpreterC.dataC  # Get the list of available ports in model that could be used to connect with InterpreterC.dataC.
+pa sc -co InterpreterA.dataA Sensor.sensorData  # Connect InterpreterA.dataA (pattern side) with Sensor.sensorData (model side).
+pa sc -co InterpreterB.dataB SensorClone1.sensorData  # Connect InterpreterB.dataB (pattern side) with SensorClone1.sensorData (model side).
+pa sc -co InterpreterC.dataC SensorClone2.sensorData  # Connect InterpreterC.dataC (pattern side) with SensorClone2.sensorData (model side).
+pa sc -co Voter.resultData Receiver.sensorData  # Connect Voter.resultData (pattern side) with Receiver.sensorData (model side).
+pa sc -col  # get the list of connections already made.
+pa sc -cptl  # get list of ports to be configured.
+pa sc -cpd ALL  # Choose to remove all the ports as decision.
+pa sc -tctl  # Get list of tasks to be mapped. 
+pa sc -tcn SensorClone1 BusEnvironment  # Map task SensorClone1 in a new CPU that will be linked to the bus BusEnvironment.
+pa sc -tcm SensorClone2 SensorClone1  # Map task SensorClone2 in the same CPU as SensorClone1.
+pa sc -tcn Voter MainBus  # Map task Voter in a new CPU that will be linked to the bus MainBus.
+pa sc -mcn SensorClone1.sensorData BusReceiver  # Map channel SensorClone1.sensorData in a new Memory that will be linked to the bus BusReceiver.
+pa sc -mcm InterpreterA.resA SensorClone1.sensorData  # Map channel InterpreterA.resA in the same Memory as SensorClone1.sensorData.
+pa sc -mctl  # Get list of channels to be mapped.
+pa sc -ua Timer dataReceivingTimeout 1000  # Change the value of the attribut dataReceivingTimeout to 1000.
+pa sc -m resources/test/cli/testPatternHandling/tmr/modelWithOneSensor-incomplete-config.json  # Create the configuration json file by giving a name and a path for this json file.